Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Gohir.A11G075800.1.v1.1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 445

Length: 742
ACGTcount: A:0.25, C:0.19, G:0.31, T:0.25


Found at i:613 original size:6 final size:6

Alignment explanation


    Indices: 602--647  Score: 92
    Period size: 6  Copynumber: 7.7  Consensus size: 6

        592 ATTAGCATTC

                                                                 
        602 AGGCTG AGGCTG AGGCTG AGGCTG AGGCTG AGGCTG AGGCTG AGGC
          1 AGGCTG AGGCTG AGGCTG AGGCTG AGGCTG AGGCTG AGGCTG AGGC

        648 AAGCTTAGCT


Statistics
Matches: 40,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   40  1.00

ACGTcount: A:0.17, C:0.17, G:0.50, T:0.15


Consensus pattern (6 bp):   
AGGCTG

Done.