Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Gohir.A12G031200.2.v1.1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1818
ACGTcount: A:0.29, C:0.19, G:0.21, T:0.32


Found at i:633 original size:4 final size:4

Alignment explanation


    Indices: 624--656  Score: 57
    Period size: 4  Copynumber: 8.2  Consensus size: 4

        614 TGATGAATTA

                         *                           
        624 TATG TATG TATA TATG TATG TATG TATG TATG T
          1 TATG TATG TATG TATG TATG TATG TATG TATG T

        657 TTGTTTTGTT


Statistics
Matches: 27,  Mismatches: 2, Indels: 0
        0.93            0.07        0.00

Matches are distributed among these distances:
   4   27  1.00

ACGTcount: A:0.27, C:0.00, G:0.21, T:0.52


Consensus pattern (4 bp):   
TATG

Done.