Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: XR_002445160.1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 8395
ACGTcount: A:0.30, C:0.16, G:0.21, T:0.34


Found at i:2151 original size:7 final size:7

Alignment explanation


    Indices: 2139--2163  Score: 50
    Period size: 7  Copynumber: 3.6  Consensus size: 7

       2129 GACAACAGTA

                   
       2139 AAACCCT
          1 AAACCCT

                   
       2146 AAACCCT
          1 AAACCCT

                   
       2153 AAACCCT
          1 AAACCCT

                
       2160 AAAC
          1 AAAC

       2164 TTTCGACCCT


Statistics
Matches: 18,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   7   18  1.00

ACGTcount: A:0.48, C:0.40, G:0.00, T:0.12


Consensus pattern (7 bp):   
AAACCCT
Done.