Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: XM_021439476.1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2530
ACGTcount: A:0.33, C:0.18, G:0.22, T:0.27


Found at i:306 original size:2 final size:2

Alignment explanation


    Indices: 291--324  Score: 50
    Period size: 2  Copynumber: 17.0  Consensus size: 2

        281 GCATAAATGC

                      *  *                                    
        291 AG AG AG AT AA AG AG AG AG AG AG AG AG AG AG AG AG
          1 AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG AG

        325 GCGCTCGAGT


Statistics
Matches: 29,  Mismatches: 3, Indels: 0
        0.91            0.09        0.00

Matches are distributed among these distances:
   2   29  1.00

ACGTcount: A:0.53, C:0.00, G:0.44, T:0.03


Consensus pattern (2 bp):   
AG

Done.