Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: Tc04v2_t022150.1

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 1729
ACGTcount: A:0.32, C:0.16, G:0.24, T:0.28


Found at i:327 original size:6 final size:6

Alignment explanation


    Indices: 316--342  Score: 54
    Period size: 6  Copynumber: 4.5  Consensus size: 6

        306 ACCCACCGAC

                                           
        316 CCGAAT CCGAAT CCGAAT CCGAAT CCG
          1 CCGAAT CCGAAT CCGAAT CCGAAT CCG

        343 GGATCGAGGT


Statistics
Matches: 21,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   6   21  1.00

ACGTcount: A:0.30, C:0.37, G:0.19, T:0.15


Consensus pattern (6 bp):   
CCGAAT

Done.