Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1006
Parameters: 2 7 7 80 10 50 1000
Length:  154985

Tables:   1   2   

This is table  2  of  2  ( 142 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
132569--132593
13
1.9
13
100
0
50
36
16
16
32
1.90
132572--132625
22
2.5
22
88
5
76
33
12
20
33
1.91
132731--132771
20
2.0
20
90
9
66
53
19
0
26
1.45
138721--138787
33
2.0
33
86
11
93
32
16
13
37
1.88
138857--138883
13
2.1
13
100
0
54
40
14
14
29
1.86
138838--138902
32
2.0
32
90
3
103
40
16
16
26
1.90
138891--138943
20
2.7
20
93
0
97
24
15
24
35
1.94
143490--143743
103
2.5
101
83
5
312
27
26
13
32
1.94
145163--145236
27
2.7
27
89
0
112
24
16
33
25
1.95
147397--147546
52
2.9
52
84
0
192
43
12
16
28
1.83
147607--147644
20
1.9
20
100
0
76
31
23
7
36
1.84
150983--151022
21
1.9
21
100
0
80
20
10
15
55
1.68
151329--151355
13
2.1
13
100
0
54
40
14
14
29
1.86
151311--151377
34
2.0
34
85
5
91
41
16
13
28
1.86
151424--151478
20
2.6
21
88
5
76
34
14
9
41
1.77
152577--152602
13
2.0
13
100
0
52
76
0
7
15
0.99
152610--152666
21
2.7
21
94
0
96
35
10
19
35
1.86
152722--152789
19
3.9
19
78
21
85
35
11
14
38
1.83
152743--152767
13
1.9
13
100
0
50
36
16
16
32
1.90
152724--152786
32
2.0
32
96
0
117
34
12
15
36
1.86
152829--152854
13
2.0
13
100
0
52
30
15
15
38
1.88
152809--152875
33
2.0
33
88
0
98
25
14
16
43
1.86

Tables:   1   2

The End!