Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1037
Parameters: 2 7 7 80 10 50 1000
Length:  263376

Tables:   1   2   

This is table  2  of  2  ( 147 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
196073--196103
15
2.0
16
93
6
55
51
19
9
19
1.74
197763--197802
13
3.1
13
81
0
53
35
17
12
35
1.88
202254--202303
3
16.7
3
91
0
82
30
32
0
38
1.58
202258--202303
18
2.6
18
100
0
92
28
32
0
39
1.57
209323--209374
20
2.5
21
84
9
63
44
7
15
32
1.75
210185--210264
31
2.6
31
81
0
97
17
25
27
30
1.97
210435--210553
37
3.3
37
84
3
145
31
17
28
21
1.96
211690--211734
11
3.9
11
77
11
54
4
0
15
80
0.87
220161--220236
12
6.9
11
75
15
52
39
2
48
9
1.49
220160--220245
24
3.8
24
72
17
85
41
2
45
10
1.51
220151--220269
42
2.8
42
92
0
193
42
2
46
8
1.47
230572--230647
12
6.9
11
75
15
52
39
2
48
9
1.49
230562--230680
42
2.8
42
93
0
202
42
1
46
9
1.46
230637--230686
18
2.8
18
81
6
57
44
2
46
8
1.44
235715--235833
42
2.8
42
92
0
193
8
46
2
42
1.47
235748--235823
12
6.9
11
75
15
52
9
48
2
39
1.49
235739--235824
24
3.8
24
72
17
85
10
45
2
41
1.51
235730--235800
18
3.6
18
69
20
52
9
43
2
43
1.52
244818--244879
32
1.9
32
96
0
115
35
17
12
33
1.88
254235--254353
42
2.8
42
92
0
193
8
46
2
42
1.47
254268--254343
12
6.9
11
75
15
52
9
48
2
39
1.49
254259--254344
24
3.8
24
72
17
85
10
45
2
41
1.51
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
254250--254320
18
3.6
18
69
20
52
9
43
2
43
1.52
255593--258577
158
18.8
159
67
10
753
36
13
18
31
1.90
255379--259331
475
8.3
475
82
5
4210
35
14
18
31
1.91
255379--259331
951
4.1
946
82
4
4423
35
14
18
31
1.91
258695--258756
32
1.9
32
96
0
115
35
17
12
33
1.88

Tables:   1   2

The End!