Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1076
Parameters: 2 7 7 80 10 50 1000
Length:  197709

Tables:   1   2   

This is table  2  of  2  ( 139 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
168213--168277
27
2.4
28
82
10
80
15
1
10
72
1.19
168230--168279
9
5.6
9
79
9
57
14
2
8
76
1.10
169081--169311
52
4.5
51
80
4
194
36
14
24
24
1.93
169370--169488
62
1.9
62
80
0
139
37
14
25
22
1.92
169540--169649
32
3.5
32
75
9
111
25
17
31
25
1.97
169629--169837
32
6.7
32
82
1
192
20
16
31
31
1.95
169562--169837
64
4.4
63
80
3
254
20
16
32
30
1.95
169756--170668
28
32.3
28
77
4
424
22
16
29
31
1.95
169978--170442
85
5.5
85
73
9
218
24
16
29
30
1.96
169754--171053
56
22.8
56
74
7
828
23
16
29
31
1.96
170677--171053
28
13.2
28
79
6
373
24
17
28
29
1.97
175281--175423
51
2.8
50
84
3
180
26
12
12
48
1.77
179917--180275
199
1.8
199
91
1
603
35
15
25
23
1.94
189105--189161
13
3.9
13
72
24
51
33
14
19
33
1.91
189104--189193
32
2.8
32
93
0
144
32
14
16
36
1.89
189118--189180
19
3.7
18
72
24
55
31
12
17
38
1.87
189232--189258
13
2.1
13
100
0
54
29
14
14
40
1.86
196245--196274
8
3.6
8
91
8
51
86
13
0
0
0.57
197535--197645
30
3.7
30
90
4
163
25
32
18
23
1.97

Tables:   1   2

The End!