Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1083
Parameters: 2 7 7 80 10 50 1000
Length:  33907

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--2139
474
4.5
475
92
1
3380
35
15
19
29
1.92
2--2139
950
2.3
948
91
1
3401
35
15
19
29
1.92
2397--2421
13
1.9
13
100
0
50
36
16
16
32
1.90
2377--2443
33
2.0
33
85
0
89
32
10
14
41
1.80
2504--2613
52
2.1
52
93
0
184
34
18
15
31
1.92
5715--8232
475
5.3
475
86
2
3408
36
13
19
30
1.90
5883--7991
158
13.3
156
66
13
551
37
13
19
29
1.90
9845--9967
42
2.9
42
90
1
183
44
2
44
8
1.46
9854--9939
24
3.8
24
72
17
76
43
2
44
10
1.51
18031--18149
42
2.8
42
91
2
195
44
1
45
8
1.44
18106--18155
18
2.8
18
81
6
57
44
2
46
8
1.44
27409--33277
471
12.4
474
85
4
6995
36
14
19
29
1.91
30724--32817
158
13.3
156
65
14
557
35
15
18
29
1.92
33530--33554
13
1.9
13
100
0
50
36
16
16
32
1.90
33510--33576
33
2.0
33
85
0
89
32
10
14
41
1.80
33637--33745
52
2.1
52
91
1
175
33
18
15
32
1.92

Tables:   1

The End!