Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1132
Parameters: 2 7 7 80 10 50 1000
Length:  29472

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3179--3399
79
2.8
79
80
4
241
33
11
27
27
1.92
5507--5811
150
2.0
150
89
2
461
38
19
16
26
1.92
6592--6621
11
2.7
11
100
0
60
26
0
0
73
0.84
6603--6875
142
1.9
142
86
6
394
43
12
11
32
1.78
7950--7994
18
2.5
18
92
0
72
4
26
0
68
1.08
12046--12083
16
2.4
16
100
0
76
31
26
5
36
1.79
13369--13448
16
4.9
16
76
11
65
76
6
0
17
0.99
13379--13438
13
4.3
14
76
17
54
76
8
0
15
1.00
13377--13418
19
2.3
19
87
4
59
78
4
0
16
0.91
13378--13448
15
4.9
15
75
16
69
77
7
0
15
0.97
13392--13429
20
1.9
19
89
5
58
76
7
0
15
1.01
13413--13446
7
4.7
7
89
7
50
76
8
0
14
1.01
15085--15125
13
3.1
13
92
3
64
46
12
36
4
1.63
27459--27488
11
2.7
11
94
0
51
83
0
16
0
0.65
28522--29467
44
21.8
43
80
5
831
14
28
17
40
1.88
28563--29467
130
7.0
129
84
3
957
14
28
17
39
1.89

Tables:   1

The End!