Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1195
Parameters: 2 7 7 80 10 50 1000
Length:  269935

Tables:   1   2   

This is table  2  of  2  ( 168 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
183105--183152
20
2.3
20
85
3
60
41
10
8
39
1.69
183835--184126
147
2.0
146
86
3
408
39
5
7
47
1.56
184258--184341
20
4.2
20
71
14
66
44
13
9
33
1.76
188756--188792
19
1.9
19
94
0
65
51
0
10
37
1.37
188762--188801
19
2.2
19
86
4
55
55
0
7
37
1.29
191680--191734
16
3.5
16
80
9
60
40
10
16
32
1.83
193834--193884
23
2.1
25
85
7
70
78
0
19
1
0.85
193834--193885
16
3.2
16
86
10
70
78
0
19
1
0.84
193847--193885
17
2.4
17
95
4
71
79
0
20
0
0.73
194247--194271
2
12.5
2
100
0
50
48
0
0
52
1.00
195445--195678
97
2.4
96
89
1
360
26
29
12
30
1.93
198773--198819
24
1.9
25
91
4
78
55
0
0
44
0.99
198860--198904
23
1.9
24
86
4
65
57
2
0
40
1.11
199425--199452
2
14.0
2
100
0
56
50
0
0
50
1.00
201087--201117
14
2.2
14
100
0
62
35
6
32
25
1.82
212544--212736
95
2.0
95
97
0
368
25
17
15
40
1.89
215339--215377
2
19.5
2
100
0
78
0
48
0
51
1.00
215603--215645
22
1.9
23
90
4
70
34
0
0
65
0.93
215651--215713
30
2.1
30
82
11
76
49
7
0
42
1.32
215867--215908
22
1.9
22
90
9
68
38
0
0
61
0.96
219044--219122
39
2.1
39
95
2
142
29
10
8
51
1.65
221631--221668
15
2.4
17
86
8
53
44
7
2
44
1.47
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
225592--225629
18
2.1
18
85
9
51
44
0
15
39
1.47
228642--228696
20
2.8
20
88
0
74
32
18
12
36
1.88
228756--228805
19
2.6
19
83
3
55
36
16
16
32
1.90
231494--231581
13
7.1
13
75
14
96
35
14
17
32
1.90
231492--231581
24
3.7
24
95
3
153
35
14
16
33
1.89
231515--231576
11
5.3
11
74
14
61
37
12
16
33
1.87
237206--237248
22
1.9
23
86
13
63
39
20
6
32
1.80
237643--237697
20
2.8
20
88
0
83
32
18
10
38
1.85
237757--237818
19
3.6
18
73
24
62
33
12
16
37
1.87
245069--245156
36
2.5
35
77
17
110
53
1
0
45
1.07
245663--245738
25
2.7
29
75
20
79
57
1
0
40
1.07
250427--250516
43
2.1
43
97
0
171
42
12
11
34
1.78
251972--252035
28
2.3
27
84
12
85
51
0
4
43
1.22
253057--253102
14
3.0
15
84
12
58
65
2
0
32
1.05
253077--253102
7
3.7
7
100
0
52
69
0
0
30
0.89
253453--253566
19
6.8
18
74
23
88
35
14
15
34
1.88
253472--253529
13
4.0
13
76
23
62
34
13
15
36
1.87
253453--253547
32
3.0
32
93
3
158
35
14
14
34
1.87
253618--253642
13
1.9
13
100
0
50
32
16
16
36
1.90
258480--258514
3
11.7
3
100
0
70
68
0
0
31
0.90
260822--260867
23
2.0
23
86
0
65
50
0
2
47
1.13
263322--263352
15
2.0
16
93
6
55
32
25
0
41
1.56
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
264229--264432
58
3.5
58
73
7
182
44
15
10
29
1.80
265736--266971
616
2.0
615
88
2
1827
36
12
13
36
1.83
267529--267581
19
2.7
20
82
2
72
28
16
16
37
1.91
269240--269280
3
13.7
3
84
0
55
41
0
31
26
1.56

Tables:   1   2

The End!