Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1201
Parameters: 2 7 7 80 10 50 1000
Length:  28045

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
179--216
18
2.1
18
85
9
51
81
2
7
7
0.96
334--382
16
3.0
16
82
11
55
75
0
22
2
0.90
3472--4132
52
12.8
52
78
5
536
26
25
16
32
1.96
3524--4092
156
3.7
156
88
3
717
26
25
16
31
1.96
5367--5420
20
2.7
20
82
5
65
33
16
14
35
1.90
5449--5504
20
2.9
19
89
2
76
41
12
16
30
1.85
5454--5504
19
2.6
20
87
3
68
43
13
15
27
1.85
8988--9061
31
2.4
30
78
8
78
51
1
20
27
1.55
10215--10253
20
2.0
19
95
5
69
30
10
23
35
1.88
18921--18973
20
2.6
21
79
8
65
28
15
15
41
1.87
18961--19018
13
4.9
13
74
23
65
34
15
15
34
1.89
18961--19039
33
2.4
33
95
0
140
32
13
16
36
1.88
18974--19038
20
3.6
19
71
26
61
30
13
16
38
1.88
19028--19067
20
2.0
20
90
0
62
30
7
22
40
1.81
21716--21768
20
2.6
20
85
8
72
43
11
13
32
1.79
23438--23493
20
2.8
21
79
15
57
80
3
8
7
1.01
23592--23640
16
3.0
16
82
11
55
75
0
22
2
0.90
26733--27308
52
11.2
52
78
6
501
26
25
15
31
1.96
26785--27218
156
2.8
156
93
1
703
26
25
16
31
1.96

Tables:   1

The End!