Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1276
Parameters: 2 7 7 80 10 50 1000
Length:  176520

Tables:   1   2   

This is table  2  of  2  ( 139 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
152418--152762
83
4.2
83
78
8
305
11
17
32
38
1.86
152298--152592
123
2.4
123
86
2
403
11
17
31
39
1.86
152298--152674
206
1.8
206
85
4
526
11
17
32
38
1.86
152485--152762
81
3.4
79
81
5
315
11
17
33
37
1.87
153212--153256
22
2.0
22
83
8
56
22
4
6
66
1.33
154407--154520
54
2.1
54
91
0
183
38
17
22
21
1.93
154676--154723
23
2.1
23
92
0
78
41
14
18
25
1.88
154684--154733
23
2.2
23
89
7
75
40
18
18
24
1.91
154748--154807
26
2.3
26
91
0
102
45
20
25
10
1.81
155353--155399
24
1.9
25
91
4
78
74
10
12
2
1.16
161092--161121
15
2.0
15
100
0
60
33
13
13
40
1.83
161110--161217
48
2.2
49
86
4
148
37
16
14
30
1.89
165869--165946
38
2.1
38
95
0
138
20
17
15
46
1.84
167058--167083
13
2.0
13
100
0
52
30
15
15
38
1.88
167038--167101
32
2.0
33
90
3
103
28
14
15
42
1.86
169603--169627
13
1.9
13
100
0
50
32
16
20
32
1.94
175811--175836
13
2.0
13
100
0
52
30
15
15
38
1.88
175791--175854
32
2.0
33
90
3
103
28
14
15
42
1.86
175906--175958
19
2.7
19
88
2
70
28
18
16
35
1.93

Tables:   1   2

The End!