Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1281
Parameters: 2 7 7 80 10 50 1000
Length:  186375

Tables:   1   2   

This is table  2  of  2  ( 135 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
156121--156218
34
2.9
34
89
1
144
30
11
35
22
1.89
164561--164585
13
1.9
13
100
0
50
36
16
16
32
1.90
164626--164692
33
2.0
33
88
0
98
40
14
11
32
1.83
164648--164672
13
1.9
13
100
0
50
32
16
16
36
1.90
170427--170472
23
2.0
23
91
8
76
41
4
2
52
1.33
171005--171101
22
4.3
22
70
8
70
59
1
5
34
1.26
171004--171067
25
2.4
26
73
14
60
64
0
4
31
1.14
174584--174645
26
2.4
25
84
7
72
46
1
1
50
1.20
179099--179133
17
2.1
17
89
5
54
48
5
0
45
1.26
179696--179759
29
2.1
31
82
5
78
40
0
3
56
1.15
179804--179828
13
1.9
13
100
0
50
56
4
0
40
1.18
181356--181385
13
2.3
13
94
0
51
0
16
0
83
0.65
185364--185520
10
15.0
10
79
9
120
34
1
14
49
1.52
185369--185524
2
80.5
2
67
6
61
35
1
13
50
1.50
185402--185495
15
6.1
15
73
13
50
31
0
15
52
1.44

Tables:   1   2

The End!