Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1314
Parameters: 2 7 7 80 10 50 1000
Length:  28625

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
151--185
16
2.2
16
89
0
52
77
5
2
14
1.07
2232--2512
78
3.6
76
75
9
228
32
14
25
27
1.95
4746--4857
51
2.2
50
90
7
183
39
15
18
26
1.90
6448--6522
20
3.8
20
78
0
87
34
13
12
40
1.81
6448--6525
40
2.0
39
87
2
111
34
12
12
39
1.82
7433--7484
22
2.3
23
93
6
97
19
11
9
59
1.59
10808--10834
4
6.8
4
100
0
54
22
0
0
77
0.76
20560--20608
25
2.0
24
96
4
89
85
14
0
0
0.59
20562--20615
25
2.2
24
86
3
81
88
9
1
0
0.58
20562--20615
1
54.0
1
81
0
54
88
9
1
0
0.58
20561--20608
12
3.9
12
89
5
78
87
12
0
0
0.54
21842--22812
29
33.9
29
91
2
1445
28
32
17
21
1.96
21844--22824
86
11.4
86
90
2
1460
28
32
17
21
1.96
23338--23412
20
3.8
20
78
0
87
34
13
12
40
1.81
23338--23415
40
2.0
39
87
2
111
34
12
12
39
1.82
24323--24374
22
2.3
23
93
6
97
19
11
9
59
1.59

Tables:   1

The End!