Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1351
Parameters: 2 7 7 80 10 50 1000
Length:  39714

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1680--1755
38
2.0
38
92
0
125
26
22
15
35
1.94
6522--6572
2
24.5
2
92
7
84
49
1
1
47
1.24
6746--7186
53
7.9
54
76
16
327
39
4
6
49
1.48
6971--7186
113
2.0
108
85
9
294
38
4
7
49
1.51
7296--7377
43
1.9
43
87
0
119
45
3
9
41
1.55
7260--7516
142
1.8
135
88
8
351
42
3
8
46
1.49
7721--7760
13
3.0
14
85
10
57
52
5
0
42
1.23
7708--7766
23
2.6
23
71
15
59
47
5
0
47
1.24
12162--12304
72
2.0
73
94
4
254
34
2
6
55
1.38
21818--21863
14
3.2
14
82
14
58
30
4
13
52
1.59
21544--21855
158
2.0
154
84
7
407
32
14
11
41
1.82
33500--33529
13
2.2
14
94
5
53
6
3
0
90
0.56
33640--33682
14
2.9
14
82
10
50
2
18
0
79
0.85
35819--35876
26
2.4
25
77
11
66
3
20
1
74
1.06
35961--36748
395
2.0
390
90
1
1243
34
16
12
36
1.86
37216--37246
16
1.9
16
93
0
53
25
0
0
74
0.82
38685--38712
14
2.0
14
100
0
56
71
0
7
21
1.09
38726--38782
21
2.7
21
97
0
105
31
10
19
38
1.86

Tables:   1

The End!