Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1426
Parameters: 2 7 7 80 10 50 1000
Length:  170309

Tables:   1   2   

This is table  2  of  2  ( 140 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
151221--151290
2
34.0
2
75
5
50
45
4
4
45
1.42
151209--151290
42
2.0
42
97
0
155
41
4
7
46
1.53
152108--152171
25
2.6
24
76
11
67
65
1
1
31
1.11
154478--154514
16
2.4
16
90
4
58
51
0
0
48
1.00
154473--154514
15
2.7
15
85
3
57
50
0
0
50
1.00
154473--154514
8
5.4
8
80
5
50
50
0
0
50
1.00
154548--154625
21
3.7
21
70
17
56
60
1
0
38
1.05
155090--155124
16
2.2
16
94
0
61
54
0
0
45
0.99
157017--157049
12
2.8
12
86
13
50
45
0
0
54
0.99
157560--157617
29
2.1
27
90
6
89
44
0
0
55
0.99
159785--159821
2
18.5
2
100
0
74
51
0
0
48
1.00
160393--160438
24
1.9
24
81
0
56
17
4
6
71
1.24
161175--161518
171
2.0
171
86
0
472
35
9
29
25
1.87
163660--163722
25
2.4
27
78
13
76
36
4
17
41
1.71
163675--163725
25
2.0
25
96
0
93
31
5
15
47
1.70
164614--164651
14
2.7
14
100
0
76
57
0
5
36
1.21
164604--164646
23
1.9
22
86
13
61
58
0
4
37
1.19
164608--164654
5
10.0
5
77
13
55
57
0
4
38
1.18
169501--169527
2
13.5
2
100
0
54
0
0
48
51
1.00
169646--169684
20
1.9
21
85
15
55
43
7
2
46
1.46

Tables:   1   2

The End!