Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1495
Parameters: 2 7 7 80 10 50 1000
Length:  148766

Tables:   1   2   

This is table  2  of  2  ( 138 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
121699--121765
21
3.2
20
71
12
64
56
2
1
38
1.24
121968--122117
80
1.9
80
91
2
248
38
10
16
35
1.83
126569--126596
8
3.5
8
100
0
56
64
0
0
35
0.94
127028--127080
17
3.0
19
73
18
60
54
1
13
30
1.49
127704--127743
9
4.4
9
80
0
53
70
0
2
27
1.01
127704--127758
27
2.1
26
86
6
76
67
0
1
30
1.01
128848--128873
2
13.0
2
100
0
52
50
0
0
50
1.00
130149--130190
13
2.8
15
79
20
52
42
0
0
57
0.99
130154--130180
13
2.1
13
100
0
54
40
0
0
59
0.98
130778--130812
2
17.5
2
100
0
70
51
0
0
48
1.00
132660--132725
29
2.2
31
78
10
75
48
0
1
50
1.10
132980--133054
20
3.8
20
78
0
87
34
13
12
40
1.81
132980--133057
40
2.0
39
87
2
111
34
12
12
39
1.82
147071--147121
26
2.0
26
96
0
93
86
13
0
0
0.58
147072--147121
13
3.8
13
89
0
82
88
12
0
0
0.53
147073--147128
1
56.0
1
81
0
58
89
8
1
0
0.56
148352--148732
29
13.6
29
86
7
547
28
33
15
22
1.95
148351--148732
85
4.5
86
88
5
568
28
33
15
22
1.95

Tables:   1   2

The End!