Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1500
Parameters: 2 7 7 80 10 50 1000
Length:  77835

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11610--11660
14
3.6
14
81
5
66
33
1
0
64
1.05
25089--25206
58
2.0
59
90
3
184
26
13
22
38
1.91
35393--35433
20
2.0
20
95
0
73
17
0
4
78
0.93
35707--36161
240
1.9
239
86
3
646
23
15
14
46
1.82
37623--37684
26
2.4
25
86
10
81
37
8
12
41
1.73
37694--37791
31
3.2
31
73
11
101
22
18
14
44
1.85
37693--37811
62
1.9
62
91
0
193
22
17
13
46
1.83
39550--39585
18
2.0
18
94
0
63
25
33
19
22
1.97
39565--39645
42
1.9
42
92
0
135
27
27
19
25
1.99
43520--43609
45
2.0
45
97
0
171
50
8
12
28
1.70
43855--43915
29
2.1
29
90
3
97
39
3
1
55
1.26
44988--45028
2
20.5
2
100
0
82
51
0
0
48
1.00
45795--45847
25
2.0
27
82
7
65
43
0
0
56
0.99
56680--56705
2
13.0
2
100
0
52
0
50
0
50
1.00
63981--64017
16
2.3
16
100
0
74
21
10
5
62
1.48
66478--66995
260
2.0
260
100
0
1036
30
14
20
34
1.93
74910--74948
11
3.6
11
82
6
53
43
0
0
56
0.99
74908--74948
21
2.0
21
90
0
64
43
0
0
56
0.99
75568--75594
4
6.8
4
100
0
54
51
22
0
25
1.48
75199--75640
214
2.0
211
83
9
552
28
15
16
39
1.89
75199--75640
220
2.0
208
83
9
546
28
15
16
39
1.89

Tables:   1

The End!