Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1617
Parameters: 2 7 7 80 10 50 1000
Length:  19532

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1257--1313
21
2.7
21
97
0
105
33
10
19
36
1.86
1369--1426
19
3.4
19
73
26
74
31
10
15
43
1.80
1390--1414
13
1.9
13
100
0
50
36
16
16
32
1.90
1461--1527
33
2.0
33
91
0
107
28
14
13
43
1.84
1489--1527
20
2.0
20
94
0
69
33
15
10
41
1.81
1481--1507
13
2.1
13
100
0
54
29
14
14
40
1.86
3927--4307
104
3.6
103
74
15
393
28
24
13
33
1.93
4080--4152
28
2.6
30
87
8
100
24
30
19
26
1.98
3812--4375
212
2.6
212
95
1
995
27
26
14
31
1.94
3927--4308
52
7.3
51
70
13
249
28
25
13
33
1.93
4292--4368
28
2.8
28
87
0
100
23
33
19
23
1.97
16905--16961
1
57.0
1
85
0
78
92
5
1
0
0.42
17950--18078
64
2.0
65
93
4
226
32
27
21
17
1.96
18015--19094
53
20.2
54
90
6
1624
29
29
20
20
1.98
18015--19094
105
10.1
108
89
8
1610
29
29
20
20
1.98

Tables:   1

The End!