Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1646
Parameters: 2 7 7 80 10 50 1000
Length:  30067

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11--1690
27
61.9
27
76
6
1291
28
15
31
24
1.96
1--1696
680
2.5
679
87
3
2344
28
15
31
24
1.96
1294--1567
82
3.4
78
85
5
295
27
14
34
23
1.94
2447--2472
13
2.0
13
100
0
52
30
15
15
38
1.88
3170--3213
21
2.1
21
83
8
54
25
31
4
38
1.76
5019--5057
13
3.0
13
96
0
69
41
12
15
30
1.85
5043--5121
20
3.7
20
76
15
77
44
15
13
26
1.84
8106--29889
27
800.6
27
75
8
15352
25
31
14
28
1.95
13734--13868
70
1.9
70
86
3
191
24
30
15
29
1.96
17342--17385
22
2.0
22
86
0
61
20
31
18
29
1.96
17514--17646
69
1.9
69
84
3
178
22
33
16
27
1.96
18415--18456
21
2.0
21
90
0
66
21
45
16
16
1.86
29615--29803
82
2.3
82
76
5
195
28
30
14
26
1.95
29891--30067
26
6.8
27
74
10
138
26
16
32
24
1.96
29890--30067
79
2.3
77
79
7
207
26
16
32
24
1.96

Tables:   1

The End!