Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1756
Parameters: 2 7 7 80 10 50 1000
Length:  59520

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4127--4156
3
10.0
3
92
0
51
66
3
0
30
1.07
6404--6437
2
17.0
2
93
0
59
50
2
0
47
1.16
10082--10120
20
2.0
20
90
10
62
38
0
0
61
0.96
10733--10764
2
16.5
2
93
6
57
50
0
0
50
1.00
10733--10771
8
4.4
9
87
12
55
48
0
0
51
1.00
12431--12484
14
3.7
14
77
5
54
68
0
1
29
1.00
21148--21221
20
3.8
19
80
5
94
41
10
13
33
1.79
21794--22977
29
40.5
29
85
5
1371
23
16
30
29
1.96
21794--22980
57
20.3
57
86
4
1396
23
16
30
29
1.96
22746--22920
64
2.7
64
93
0
305
22
17
28
30
1.97
22746--22919
96
1.8
96
94
0
312
22
17
28
31
1.97
35441--35589
52
2.9
51
87
4
217
30
17
18
33
1.94
35578--35602
13
1.9
13
100
0
50
36
16
16
32
1.90
35643--35709
33
2.0
33
88
0
98
40
14
11
32
1.83
35665--35689
13
1.9
13
100
0
50
32
16
16
36
1.90
36453--36664
52
4.2
52
76
12
208
33
16
25
24
1.96
36560--36649
43
2.1
43
93
0
153
31
17
24
26
1.97
36653--37103
30
15.1
30
78
9
359
26
16
29
28
1.97
36653--37108
57
7.7
59
74
9
315
25
16
29
28
1.97
36660--36883
88
2.6
88
94
0
387
20
18
29
31
1.96
36934--37105
29
6.0
27
80
8
119
23
17
30
28
1.97
38542--38660
1
119.0
1
75
0
94
1
2
9
86
0.73
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38542--38660
9
12.7
9
79
16
109
1
2
9
86
0.73
38542--38660
18
6.1
19
78
16
120
1
2
9
86
0.73
38542--38660
47
2.5
47
87
5
161
1
2
9
86
0.73
48348--48374
10
2.7
10
100
0
54
77
22
0
0
0.76
52504--52704
52
3.9
52
95
1
341
29
17
19
33
1.95
52693--52717
13
1.9
13
100
0
50
36
16
16
32
1.90
52780--52804
13
1.9
13
100
0
50
32
16
16
36
1.90
52862--52903
21
2.0
21
90
0
66
35
14
14
35
1.86
57784--58232
31
14.3
32
85
9
590
30
34
18
16
1.93

Tables:   1

The End!