Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1826
Parameters: 2 7 7 80 10 50 1000
Length:  34315

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
808--859
23
2.2
24
82
3
61
5
11
11
71
1.31
6763--6880
51
2.3
52
80
4
132
36
14
22
27
1.92
6812--7119
79
3.9
79
90
0
456
33
15
24
26
1.95
6812--7119
157
2.0
158
89
0
474
33
15
24
26
1.95
7048--7169
53
2.4
50
81
13
140
31
14
26
27
1.95
6891--7379
210
2.3
210
95
2
862
32
14
25
27
1.95
7143--7330
78
2.4
79
94
1
342
32
15
25
26
1.96
7258--7383
53
2.4
51
81
13
150
30
14
26
28
1.95
8308--8382
18
4.1
18
71
10
62
8
20
37
34
1.82
8333--8431
43
2.2
43
85
7
126
8
17
37
37
1.79
8930--9093
50
3.3
50
91
0
274
15
27
14
42
1.86
9215--9241
6
4.5
6
100
0
54
29
0
14
55
1.40
10587--10640
22
2.5
22
96
3
101
61
5
11
22
1.50
11552--11626
20
3.8
20
80
3
80
40
12
13
34
1.81
11549--11626
40
2.0
39
87
2
111
39
12
12
34
1.82
16791--16874
20
4.3
19
75
15
75
52
1
0
46
1.08
16802--16852
25
2.1
24
82
17
61
54
0
0
45
0.99
16803--16877
39
1.9
39
84
10
100
54
1
0
44
1.08
18438--18473
2
18.0
2
100
0
72
50
0
0
50
1.00
26324--26361
2
19.0
2
100
0
76
50
0
0
50
1.00

Tables:   1

The End!