Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1844
Parameters: 2 7 7 80 10 50 1000
Length:  15692

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
733--796
20
3.3
19
80
10
67
75
6
9
9
1.20
2101--4154
27
76.0
27
83
3
2242
23
30
15
30
1.95
2123--4409
54
42.1
54
83
4
2300
24
29
15
30
1.96
4135--4482
28
12.1
28
78
10
267
29
30
16
24
1.96
4130--4446
55
5.6
54
77
10
264
29
29
16
25
1.97
4064--4446
28
13.7
27
77
10
168
27
29
15
26
1.96
2114--4450
27
85.9
29
78
12
366
24
30
15
29
1.96
4130--4438
117
2.7
116
81
8
325
29
28
16
25
1.97
4397--4583
32
6.0
30
79
14
177
29
39
16
15
1.89
4417--4583
64
2.6
64
88
9
236
29
38
16
14
1.89
4441--4583
64
2.2
64
97
0
268
31
39
16
13
1.87
10342--10367
13
2.0
13
100
0
52
30
15
15
38
1.88
10323--10385
32
2.0
32
87
6
92
28
15
15
39
1.89
10969--11052
37
2.3
38
81
8
93
32
23
5
38
1.79
11055--11098
21
2.1
21
83
8
54
25
31
4
38
1.76
14966--14996
15
2.1
15
93
0
53
12
22
16
48
1.80

Tables:   1

The End!