Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1846
Parameters: 2 7 7 80 10 50 1000
Length:  186639

Tables:   1   2   

This is table  2  of  2  ( 138 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
177909--178034
32
4.0
32
82
5
125
23
28
15
32
1.95
178008--178209
27
7.0
27
74
15
172
20
35
13
30
1.91
178056--178242
34
6.0
34
72
18
181
19
35
12
32
1.89
178151--178201
26
1.9
27
84
4
68
19
37
15
27
1.92
178029--178242
61
3.5
61
92
1
369
19
35
12
31
1.89
178244--178375
33
4.1
32
91
2
201
28
28
18
25
1.98
178243--178384
65
2.2
64
91
2
223
28
29
17
24
1.97
178421--179569
43
25.0
43
75
12
939
25
25
18
30
1.98
178423--179515
92
12.0
92
87
3
1439
25
25
18
30
1.98
178392--179573
135
8.6
137
82
8
1166
25
25
18
30
1.98
179424--179778
52
6.8
52
75
9
240
23
24
16
34
1.95
180446--180470
13
1.9
13
100
0
50
36
16
16
32
1.90
180428--180494
32
2.1
33
91
2
109
34
11
17
35
1.87
180564--180691
52
2.5
52
92
1
213
34
20
19
25
1.96
183741--183765
13
1.9
13
100
0
50
32
16
16
36
1.90
183836--183860
13
1.9
13
100
0
50
40
16
20
24
1.91
183817--183879
33
1.9
32
87
3
90
39
14
17
28
1.89
184717--185201
147
3.3
148
80
5
412
34
19
19
26
1.95

Tables:   1   2

The End!