Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1893
Parameters: 2 7 7 80 10 50 1000
Length:  75764

Tables:   1   

This is table  1  of  1  ( 40 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6844--6869
13
2.0
13
100
0
52
30
15
15
38
1.88
9223--9269
21
2.3
21
76
23
55
42
4
19
34
1.70
9390--9428
13
3.0
13
96
0
69
35
15
17
30
1.91
9414--9492
20
3.7
20
78
15
77
44
15
15
25
1.85
11507--11537
15
2.1
15
93
0
53
12
22
16
48
1.80
15603--15628
13
2.0
13
100
0
52
30
15
15
38
1.88
17978--18024
21
2.3
21
76
23
55
42
4
19
34
1.70
18145--18183
13
3.0
13
96
0
69
35
15
17
30
1.91
18169--18247
20
3.7
20
78
15
77
44
15
15
25
1.85
20262--20292
15
2.1
15
93
0
53
12
22
16
48
1.80
24358--24383
13
2.0
13
100
0
52
30
15
15
38
1.88
26711--26790
24
3.6
24
69
19
73
41
3
43
11
1.58
26720--26786
21
3.2
20
72
16
64
41
4
43
10
1.59
26707--26814
42
2.6
42
90
0
180
40
3
46
9
1.54
31556--31672
42
2.8
42
85
3
139
12
42
0
43
1.48
31601--31672
21
3.2
24
68
22
66
16
41
0
41
1.48
34426--34717
159
1.8
159
78
7
333
32
16
12
38
1.86
32932--38724
611
9.5
609
87
2
7862
32
16
13
37
1.88
40645--40671
11
2.5
11
100
0
54
77
7
7
7
1.12
40642--40687
14
3.5
14
80
17
62
80
4
6
8
1.01
40642--40689
25
2.0
24
91
4
78
79
4
6
10
1.05
41394--41469
12
6.9
11
75
15
52
39
2
48
9
1.49
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41459--41508
18
2.8
18
81
6
57
44
2
46
8
1.44
41384--41502
42
2.8
42
92
0
202
43
1
45
9
1.46
41384--41526
42
3.4
42
85
5
191
44
1
44
9
1.44
48025--49058
510
2.0
516
83
5
1311
36
13
17
32
1.88
49821--52182
599
3.9
602
84
4
2944
37
13
16
32
1.88
53069--53132
33
2.0
33
87
3
94
43
14
12
29
1.81
59252--59286
3
11.7
3
93
0
52
25
34
0
40
1.56
59249--59288
12
3.3
12
85
0
62
22
32
0
45
1.53
60119--63409
610
5.4
610
87
2
4665
37
13
16
32
1.87
65031--65106
12
6.9
11
76
20
70
40
0
46
13
1.43
65021--65139
42
2.8
42
89
0
175
46
0
42
10
1.39
65051--65109
9
6.9
9
69
11
52
44
0
44
11
1.41
68410--68443
12
2.8
12
83
16
52
11
52
0
35
1.38
68392--68443
24
2.1
25
85
3
70
11
48
0
40
1.40
70053--73153
609
5.1
610
84
3
3895
37
13
16
32
1.87
72661--73584
455
2.0
456
85
2
1261
38
13
16
31
1.88
72661--73707
455
2.3
450
83
5
1187
38
13
16
31
1.88
73110--74632
597
2.5
603
82
5
1853
37
13
17
31
1.88

Tables:   1

The End!