Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1914
Parameters: 2 7 7 80 10 50 1000
Length:  18201

Tables:   1   

This is table  1  of  1  ( 27 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34--60
2
13.5
2
100
0
54
51
0
0
48
1.00
1952--2036
30
2.9
29
79
10
91
32
3
4
58
1.36
2062--2148
30
3.0
28
80
12
86
54
4
3
37
1.38
2099--2156
30
1.9
30
82
6
73
56
5
5
32
1.43
2711--2745
2
17.5
2
100
0
70
51
0
0
48
1.00
3208--3417
10
19.8
11
65
23
62
36
0
2
60
1.13
3259--3318
26
2.2
29
80
14
74
38
0
1
60
1.07
3283--3418
59
2.4
57
83
13
165
37
0
0
61
1.07
3285--3453
77
2.1
79
81
13
190
39
1
0
58
1.10
3676--3729
22
2.5
23
82
11
78
72
7
11
9
1.29
3995--4041
24
2.0
24
91
8
78
74
0
0
25
0.82
4005--4074
19
3.7
19
82
14
83
68
0
0
31
0.90
4002--4049
13
3.9
12
77
22
55
72
0
0
27
0.84
4004--4075
24
3.2
24
78
13
80
68
0
0
31
0.90
5431--5508
35
2.4
34
81
14
92
65
0
0
34
0.93
6093--6163
20
3.5
20
77
9
72
46
0
1
52
1.09
6120--6176
30
1.9
29
82
10
71
45
0
1
52
1.11
6162--6220
25
2.4
24
83
10
75
32
0
1
66
1.02
6183--6221
18
2.2
18
90
0
60
25
0
0
74
0.82
6156--6234
25
3.0
26
73
19
74
35
0
1
63
1.03
6982--7044
33
2.0
31
90
6
99
58
9
4
26
1.49
8752--8778
2
13.5
2
100
0
54
51
0
0
48
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8778--8806
2
14.5
2
100
0
58
51
0
48
0
1.00
9545--9595
27
2.0
25
85
14
68
49
1
1
47
1.24
15567--15652
17
4.8
17
68
17
59
54
4
1
39
1.29
16236--16294
26
2.3
25
82
8
66
30
8
6
54
1.57
16976--17036
24
2.7
24
76
19
67
32
1
0
65
1.02

Tables:   1

The End!