Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1923
Parameters: 2 7 7 80 10 50 1000
Length:  65456

Tables:   1   

This is table  1  of  1  ( 64 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3539--3587
5
9.8
5
88
0
62
87
10
2
0
0.62
3538--3600
15
4.2
14
79
16
65
85
9
3
1
0.77
3538--3605
10
7.0
10
84
1
50
83
8
4
2
0.87
3538--3590
1
53.0
1
76
0
52
88
9
1
0
0.58
4820--5803
28
34.4
28
88
3
1277
28
31
17
22
1.96
4820--5803
85
11.4
85
87
3
1307
28
31
17
22
1.96
4820--5803
114
8.6
112
87
3
1277
28
31
17
22
1.96
6325--6399
20
3.8
20
78
0
87
34
13
12
40
1.81
6325--6402
40
2.0
39
87
2
111
34
12
12
39
1.82
11872--11928
15
3.6
15
71
13
51
63
5
1
29
1.27
11872--11935
33
1.9
33
100
0
128
62
4
3
29
1.31
12561--12594
2
17.5
2
93
6
61
0
50
0
50
1.00
17649--17770
50
2.4
50
87
0
181
29
18
15
36
1.91
17660--17805
50
3.0
48
85
6
172
28
17
19
34
1.95
22222--22383
50
3.2
50
81
6
168
30
18
17
33
1.94
24016--24049
11
3.0
11
86
4
50
58
2
0
38
1.13
25431--25467
19
1.9
19
88
0
56
43
8
0
48
1.32
25644--25710
32
2.1
32
85
0
89
37
13
13
35
1.84
25781--25839
27
2.2
26
80
16
68
52
5
0
42
1.23
25823--25872
13
3.7
14
85
12
61
70
0
0
30
0.88
25823--25868
7
6.7
7
83
16
53
69
0
0
30
0.89
27577--27642
34
1.9
34
93
0
114
21
3
36
39
1.69
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27618--27666
22
2.2
22
92
0
80
22
4
40
32
1.73
27584--27692
56
1.9
56
94
0
191
22
2
38
36
1.68
32372--32541
34
5.0
34
98
0
322
20
0
38
40
1.57
32397--32497
25
4.3
25
66
29
78
20
0
38
40
1.53
32508--32563
22
2.5
22
97
0
103
19
0
41
39
1.52
32481--32592
56
2.0
56
98
0
215
20
0
40
39
1.53
32372--32592
68
3.4
66
90
7
318
20
0
38
40
1.56
32372--32592
102
2.3
100
89
9
318
20
0
38
40
1.56
33147--33176
13
2.3
13
94
0
51
66
3
0
30
1.07
34728--34918
71
2.7
70
94
1
319
45
4
10
39
1.58
35166--35225
31
1.9
31
83
6
77
56
0
3
40
1.16
35251--35341
45
2.0
45
87
10
132
57
1
0
41
1.06
36937--37016
39
2.1
39
97
0
151
31
22
6
40
1.79
41014--41056
17
2.5
17
85
7
52
51
6
0
41
1.29
41952--41998
23
2.0
24
83
4
60
53
0
2
44
1.12
42816--42850
2
17.5
2
100
0
70
51
0
0
48
1.00
43583--43624
22
2.0
21
85
4
57
54
0
0
45
0.99
44458--44492
17
2.1
17
88
0
52
60
0
0
40
0.97
44825--44867
15
2.9
15
82
0
50
55
0
0
44
0.99
44824--44867
22
2.0
22
91
8
72
54
0
0
45
0.99
44818--44892
22
3.8
19
67
19
55
49
0
4
46
1.20
45481--45547
13
5.5
13
71
20
56
47
0
0
52
1.00
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
45475--45540
34
1.9
35
85
14
93
43
0
0
56
0.99
46113--46166
26
2.0
27
89
3
83
62
0
3
33
1.12
46130--46174
19
2.4
19
81
7
56
68
0
4
26
1.08
46635--46675
3
13.7
3
100
0
82
34
0
0
65
0.93
47182--47212
14
2.1
15
94
5
55
54
0
0
45
0.99
47185--47229
24
2.0
22
91
8
72
57
0
0
42
0.98
47180--47216
15
2.4
16
86
13
60
56
0
0
43
0.99
47185--47319
42
3.4
39
73
16
107
53
2
1
42
1.22
47208--47299
13
6.8
13
66
28
50
52
1
2
44
1.20
47496--47549
2
27.0
2
96
0
90
46
0
0
53
1.00
47992--48025
2
17.0
2
88
11
52
47
2
0
50
1.16
51916--51959
22
2.1
20
87
8
61
40
2
0
56
1.11
54657--54704
2
24.0
2
100
0
96
50
0
0
50
1.00
55517--55558
6
7.0
6
88
0
66
33
0
16
50
1.46
55813--55856
19
2.3
19
82
17
56
52
0
0
47
1.00
55824--55901
28
2.7
30
86
7
108
56
0
1
42
1.07
55848--55888
21
1.9
22
90
5
66
60
0
0
39
0.96
63645--63676
3
10.7
3
93
0
55
62
0
37
0
0.95
65268--65322
22
2.5
22
77
13
60
32
1
3
61
1.24
65276--65314
13
3.1
12
85
10
51
38
2
0
58
1.12

Tables:   1

The End!