Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold1989
Parameters: 2 7 7 80 10 50 1000
Length:  39149

Tables:   1   2   

This is table  2  of  2  ( 143 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31945--32274
61
5.4
61
75
7
287
30
20
24
24
1.99
31946--32274
122
2.7
122
82
3
401
30
20
24
24
1.99
32740--32962
122
1.8
122
83
3
297
29
19
26
24
1.98
32749--32968
62
3.6
60
77
9
221
28
20
25
25
1.99
33487--33633
43
3.3
43
73
11
127
46
14
22
17
1.83
33571--33672
42
2.4
41
83
8
116
41
17
23
17
1.90
34492--34730
48
5.3
48
76
15
167
38
14
27
19
1.91
34450--34736
43
6.5
42
76
13
197
39
14
26
19
1.90
34748--35057
61
5.1
61
76
6
279
31
21
24
22
1.98
34758--35095
61
5.5
60
76
8
263
30
21
24
23
1.99
34757--35056
121
2.5
122
83
6
385
31
21
24
23
1.99
35741--35844
47
2.2
46
85
10
131
40
11
27
20
1.87
35931--36089
61
2.6
61
84
6
187
29
19
25
25
1.98
36704--36829
42
3.0
40
74
11
117
42
14
24
18
1.87
36722--36826
44
2.4
43
78
6
115
38
15
25
20
1.92
36849--37064
61
3.5
61
83
1
272
29
21
24
24
1.99
34883--39149
976
4.4
970
89
4
6226
32
17
24
25
1.97
37680--37806
45
3.0
42
84
9
143
40
14
26
18
1.89
37817--38044
60
3.8
61
79
6
266
28
21
26
24
1.99
37818--38036
121
1.8
121
88
4
334
28
21
26
23
1.99
38534--38770
45
5.4
45
73
12
192
39
14
24
20
1.91
38534--38784
43
5.8
44
73
13
173
39
13
26
19
1.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
38790--39002
61
3.5
60
81
8
261
29
21
25
23
1.99

Tables:   1   2

The End!