Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2060
Parameters: 2 7 7 80 10 50 1000
Length:  27443

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1422--1474
21
2.7
20
80
8
63
47
0
0
52
1.00
3357--3396
21
1.9
21
100
0
80
42
25
10
22
1.84
4257--4288
2
16.0
2
100
0
64
50
0
0
50
1.00
6031--6104
20
3.6
20
76
7
76
36
14
10
37
1.82
6996--7035
20
2.0
21
85
5
55
20
20
12
47
1.81
14711--15452
155
4.9
152
73
9
415
40
16
14
28
1.88
14702--15132
154
2.8
154
79
6
399
39
14
15
29
1.88
16702--16765
17
3.4
17
69
22
56
53
23
0
23
1.47
16686--16777
40
2.3
40
96
0
166
55
18
1
25
1.49
17252--17351
27
3.7
27
90
0
137
46
22
8
24
1.78
17236--17352
54
2.2
53
80
5
130
46
21
8
23
1.79
21833--21906
27
2.7
27
77
8
87
47
14
6
31
1.71
22537--22652
20
6.3
18
69
20
71
61
1
0
36
1.12
22548--22621
14
5.0
15
79
17
75
63
0
0
36
0.95
22537--22659
14
9.3
14
69
23
63
60
1
0
37
1.12
22548--22652
6
17.5
6
67
27
55
61
0
0
36
1.09
23080--23119
16
2.6
16
92
4
64
35
15
22
27
1.94
25768--25804
17
2.2
17
95
0
65
29
21
21
27
1.99
26729--26760
13
2.5
13
94
0
55
50
6
37
6
1.53
26866--26944
27
2.9
28
83
7
101
44
20
11
24
1.84

Tables:   1

The End!