Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2077
Parameters: 2 7 7 80 10 50 1000
Length:  194399

Tables:   1   2   

This is table  2  of  2  ( 140 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
166206--166664
115
4.0
114
87
5
629
30
30
16
22
1.96
166206--166651
172
2.6
171
87
4
619
30
30
15
22
1.95
166733--166852
49
2.5
48
82
5
129
22
24
20
33
1.97
167230--167301
20
3.6
20
82
0
99
33
15
12
38
1.85
167230--167305
40
1.9
39
91
2
125
32
14
13
39
1.85
179657--179794
20
6.8
19
75
9
114
37
13
16
31
1.88
179699--179802
20
5.0
21
75
9
115
35
13
19
31
1.90
179659--179802
41
3.5
41
88
4
204
36
13
17
31
1.89
179656--179794
61
2.3
61
80
5
156
38
13
16
31
1.88
182391--182437
24
2.0
24
82
0
58
76
2
2
19
0.99
182387--182464
9
8.7
9
69
19
56
73
2
2
21
1.08
183114--183251
35
3.9
35
88
2
197
26
38
18
16
1.92
191292--192042
42
17.8
42
83
4
796
13
29
20
36
1.91
191290--192052
254
3.0
252
82
6
921
13
29
19
37
1.90
192480--192555
18
4.8
17
78
10
56
72
3
1
22
1.09
192618--192790
35
4.9
35
94
2
296
45
6
30
17
1.74
192669--192768
14
5.5
20
67
28
71
44
7
31
18
1.76
192617--192785
69
2.4
69
94
3
295
43
7
31
17
1.76
193710--193739
15
2.0
15
100
0
60
86
6
0
6
0.70
193788--193819
15
2.1
15
100
0
64
6
18
15
59
1.57

Tables:   1   2

The End!