Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold218
Parameters: 2 7 7 80 10 50 1000
Length:  193631

Tables:   1   2   

This is table  2  of  2  ( 145 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
162719--162839
52
2.3
52
75
8
131
29
20
9
39
1.85
162984--163024
20
2.0
20
100
0
82
36
14
4
43
1.67
164074--164172
43
2.3
43
83
1
126
33
7
10
49
1.63
168676--168751
29
2.6
28
83
4
80
35
19
17
27
1.94
168920--169076
85
1.8
86
95
4
291
49
8
2
40
1.47
168920--169099
85
2.2
83
90
7
258
50
8
3
37
1.49
169141--169202
3
20.7
3
84
12
83
70
1
0
27
0.96
169469--169567
45
2.2
44
81
12
112
35
7
16
41
1.75
171607--171651
15
3.1
15
87
6
65
31
0
0
68
0.89
173135--173169
2
17.5
2
100
0
70
51
0
0
48
1.00
174212--174247
13
2.8
13
91
0
54
13
8
0
77
0.98
178774--178908
45
3.0
45
84
4
175
37
5
2
54
1.37
179466--179490
12
2.1
12
100
0
50
16
0
0
84
0.63
179714--179754
13
3.2
13
83
12
50
26
0
0
73
0.84
179709--179757
21
2.5
19
81
18
64
26
0
0
73
0.83
179838--179872
15
2.2
16
90
5
54
34
2
0
62
1.10
182249--182295
2
24.0
2
86
4
69
48
2
2
46
1.25
182669--182725
27
2.1
29
83
9
75
54
1
0
43
1.10
185582--185612
14
2.1
15
94
5
55
70
9
0
19
1.14
185588--185627
20
2.1
19
95
4
71
72
5
0
22
1.04
188590--188646
17
3.4
17
81
13
64
40
0
1
57
1.09
190113--190180
21
3.3
21
71
18
63
45
0
0
54
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
192074--192099
13
2.0
13
100
0
52
46
7
0
46
1.31
192222--192247
2
13.0
2
100
0
52
50
0
0
50
1.00
192692--192848
1
157.0
1
100
0
314
0
100
0
0
0.00

Tables:   1   2

The End!