Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2194
Parameters: 2 7 7 80 10 50 1000
Length:  22080

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2119--2198
20
3.8
20
74
18
72
27
12
15
45
1.82
2184--2221
13
3.0
13
88
7
60
28
18
15
36
1.92
2185--2221
12
2.9
13
88
8
58
29
18
16
35
1.93
2341--2386
21
2.2
20
81
11
58
32
19
4
43
1.71
4774--4837
32
2.0
33
87
3
94
42
17
12
28
1.85
6128--6178
20
2.5
21
78
18
63
33
19
15
31
1.93
6168--6192
13
1.9
13
100
0
50
32
16
16
36
1.90
6180--6232
20
2.6
21
82
8
65
37
16
16
28
1.91
6292--6317
13
2.0
13
100
0
52
38
15
15
30
1.88
6274--6337
33
2.0
32
87
3
92
40
20
10
28
1.86
8868--8921
24
2.2
25
81
18
62
59
0
5
35
1.21
8865--8923
27
2.1
28
84
6
75
59
0
5
35
1.20
10018--10066
4
12.2
4
95
0
89
71
0
2
26
0.97
7079--12253
763
6.7
775
89
5
7481
39
11
10
38
1.76
11997--12054
23
2.5
23
81
10
64
55
0
3
41
1.17
12637--12661
13
1.9
13
100
0
50
32
16
20
32
1.94
14881--14925
21
2.1
21
84
8
56
53
4
20
22
1.63
16729--16759
15
2.1
15
93
0
53
48
16
22
12
1.80
18775--18853
20
3.7
20
72
18
68
27
15
15
41
1.87
18974--19020
21
2.3
21
79
20
55
34
19
4
42
1.70
18976--19018
20
2.2
19
84
16
52
32
18
4
44
1.71
21380--21404
12
2.1
12
100
0
50
36
16
16
32
1.90

Tables:   1

The End!