Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2200
Parameters: 2 7 7 80 10 50 1000
Length:  114701

Tables:   1   2   

This is table  2  of  2  ( 140 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
97506--97551
13
3.3
14
77
17
51
47
0
0
52
1.00
98106--98180
26
3.1
23
77
13
71
57
1
0
41
1.07
98128--98170
22
1.9
23
85
4
61
55
2
0
41
1.12
98107--98177
23
3.0
23
69
22
58
56
1
0
42
1.08
99935--99990
13
4.0
14
72
13
53
44
0
1
53
1.11
99935--100000
13
4.8
12
73
23
51
46
0
1
51
1.10
102889--102928
21
1.9
21
85
10
55
40
5
2
52
1.37
102933--102975
18
2.3
19
88
8
61
48
0
2
48
1.14
103267--103314
24
2.1
23
84
7
62
56
0
8
35
1.30
103302--103334
11
2.8
12
81
9
50
72
0
0
27
0.85
103287--103363
29
2.7
29
80
11
70
71
1
2
24
1.06
103374--103425
24
2.2
24
80
6
63
57
0
0
42
0.98
103389--103453
16
3.8
17
78
21
73
56
0
0
43
0.99
104422--104485
20
3.2
20
86
6
85
40
4
1
53
1.31
104602--104658
27
2.0
29
83
10
73
50
0
0
49
1.00
104624--104665
21
2.0
21
86
9
59
54
0
0
45
0.99
105268--105308
21
2.1
19
86
9
55
46
4
2
46
1.37
105896--105934
19
2.1
19
100
0
78
46
7
10
35
1.67
105894--105944
19
2.4
21
81
18
70
45
11
9
33
1.74
112169--112262
24
4.2
21
69
17
66
37
1
1
60
1.11

Tables:   1   2

The End!