Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2227
Parameters: 2 7 7 80 10 50 1000
Length:  151494

Tables:   1   2   

This is table  2  of  2  ( 165 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
131003--131103
27
3.7
27
76
6
98
74
5
1
17
1.12
131602--131671
35
2.0
35
82
0
86
41
21
27
10
1.85
131693--131809
57
2.1
57
100
0
234
40
29
16
14
1.88
133267--133529
97
2.7
96
88
2
366
28
23
11
37
1.89
133482--133617
69
2.0
69
89
0
209
30
20
8
40
1.83
135330--135363
16
2.1
16
100
0
68
38
26
5
29
1.80
135613--135840
113
2.0
113
95
1
413
35
15
16
31
1.91
137242--137301
13
4.5
13
76
12
50
40
3
0
56
1.16
137255--137344
32
2.6
34
76
13
87
44
1
0
54
1.07
137329--137424
14
6.4
15
67
24
60
36
1
1
61
1.10
137253--137421
5
34.4
5
65
16
59
40
1
0
57
1.10
137319--137399
20
4.0
19
77
9
72
40
1
1
56
1.15
137804--137853
22
2.3
22
79
6
57
52
4
2
42
1.31
137882--137917
16
2.2
16
90
0
54
58
5
0
36
1.22
138248--138295
10
4.6
10
78
19
53
72
0
0
27
0.84
138247--138333
16
5.5
16
75
14
74
64
0
0
35
0.94
138246--138293
11
4.5
11
80
15
64
72
0
0
27
0.84
138279--138333
23
2.3
24
81
12
69
60
0
0
40
0.97
138282--138377
31
3.3
29
74
16
101
60
0
0
39
0.97
138227--138337
16
6.9
16
71
16
52
62
0
0
37
0.96
138283--138393
55
1.9
58
85
10
158
59
0
0
38
1.10
138650--138756
8
13.5
8
73
21
84
60
0
0
39
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
138645--138734
32
2.7
33
76
10
103
61
0
0
38
0.96
138644--138756
13
8.4
14
73
18
89
60
0
0
39
0.97
138644--138755
21
5.6
20
72
21
76
60
0
0
39
0.97
138644--138743
34
3.0
34
78
10
116
61
0
0
39
0.96
142122--142205
28
3.0
28
77
19
79
38
3
0
58
1.16
142142--142216
28
2.6
28
83
14
82
34
4
0
61
1.15
142172--142214
20
2.1
21
83
12
54
34
2
0
62
1.08
143118--143162
23
2.0
23
82
8
56
57
0
2
40
1.11
143136--143185
15
3.3
15
83
13
50
60
0
4
36
1.16
143192--143259
28
2.3
28
87
7
91
63
0
2
33
1.10
143488--143543
23
2.5
21
76
18
60
58
3
0
37
1.15
143527--143583
21
2.8
21
86
7
73
56
1
0
42
1.10
143533--143583
22
2.3
23
83
12
72
56
1
0
41
1.10
143526--143595
22
3.3
22
78
7
65
57
1
0
41
1.08
144290--144358
30
2.4
26
75
20
66
65
2
1
30
1.16
144306--144403
23
4.5
22
72
24
84
65
0
1
33
1.00
144306--144403
11
9.0
11
72
26
84
65
0
1
33
1.00
144329--144399
15
4.5
15
80
16
81
67
0
0
32
0.91
144305--144429
23
5.5
23
70
21
79
64
0
0
34
0.99
144335--144420
15
6.1
15
74
20
69
66
0
0
33
0.92
144305--144428
40
3.2
40
82
13
143
65
0
0
33
0.99
148641--148687
2
23.5
2
95
0
85
48
2
0
48
1.13
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
148880--149181
145
2.1
143
87
4
432
49
2
5
41
1.41

Tables:   1   2

The End!