Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2246
Parameters: 2 7 7 80 10 50 1000
Length:  156925

Tables:   1   2   

This is table  2  of  2  ( 146 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
131535--131617
17
5.1
17
73
15
68
53
3
0
43
1.18
131557--131656
15
6.5
15
66
14
51
57
4
2
37
1.29
131544--131648
48
2.2
48
84
3
140
55
3
1
39
1.29
133746--133783
20
1.9
19
89
5
58
50
7
0
42
1.31
133833--133884
23
2.2
24
86
10
72
44
5
0
50
1.26
134002--134032
15
2.0
16
93
6
55
38
0
0
61
0.96
134084--134111
2
14.0
2
100
0
56
50
0
0
50
1.00
142340--142491
58
2.6
59
70
11
132
47
11
11
29
1.75
143549--143631
29
2.8
31
79
16
95
48
0
0
51
1.00
143880--143931
15
3.4
16
76
12
56
40
0
1
57
1.10
143910--143948
15
2.6
15
92
8
62
30
0
0
69
0.89
144473--144506
13
2.6
13
85
0
50
11
5
2
79
1.02
144703--144744
22
1.9
22
85
9
59
42
0
2
54
1.13
145453--145501
20
2.4
20
86
3
62
28
0
8
63
1.23
145733--145765
2
16.5
2
100
0
66
51
0
0
48
1.00
146852--146895
23
1.9
23
86
9
63
43
2
4
50
1.35
147107--147146
17
2.4
17
87
4
55
55
0
0
45
0.99
149541--149643
34
3.0
34
83
7
136
24
7
29
38
1.83
150227--150324
31
3.2
32
76
15
91
55
1
8
35
1.37
151431--151466
2
18.0
2
94
0
63
47
0
2
50
1.15
151672--151697
2
13.0
2
100
0
52
50
0
0
50
1.00
152102--152179
29
2.7
30
78
11
90
58
1
0
39
1.06
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
154932--155000
30
2.3
30
85
5
86
50
1
4
43
1.30
154932--155060
29
4.4
29
74
12
93
50
0
7
41
1.37
155853--155919
2
34.0
2
80
14
68
43
1
2
52
1.25
156412--156460
20
2.5
20
75
15
57
38
8
0
53
1.31

Tables:   1   2

The End!