Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2260
Parameters: 2 7 7 80 10 50 1000
Length:  24466

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1007
173
5.8
174
97
2
1863
23
17
23
35
1.95
4562--4595
1
34.0
1
87
0
50
94
5
0
0
0.32
4562--4594
12
2.8
12
100
0
66
93
6
0
0
0.33
11697--11765
24
2.9
23
89
6
102
21
11
10
56
1.64
12919--13906
142
6.9
143
89
5
1464
40
12
16
30
1.85
14205--16365
143
15.1
143
88
7
2995
41
14
15
29
1.86
14205--16365
428
5.0
425
86
9
2913
41
14
15
29
1.86
14205--16365
717
3.0
709
87
8
3006
41
14
15
29
1.86
16465--17858
272
5.2
266
89
9
2095
29
19
24
26
1.99
17765--21540
449
8.4
455
94
3
6529
26
18
29
25
1.98
20784--22293
753
2.0
752
93
4
2625
27
17
28
26
1.97
21539--24129
454
5.7
455
98
0
4971
26
18
28
25
1.98
24130--24466
174
1.9
175
98
0
649
22
19
22
35
1.96

Tables:   1

The End!