Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2275
Parameters: 2 7 7 80 10 50 1000
Length:  181829

Tables:   1   2   

This is table  2  of  2  ( 156 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
142588--142708
38
3.4
35
71
23
76
40
0
1
57
1.08
142598--142715
27
4.2
27
78
14
123
40
0
1
57
1.09
142582--142718
60
2.3
57
85
12
172
42
0
1
56
1.08
142597--142759
85
1.9
84
80
8
188
38
0
1
59
1.08
142639--142779
49
2.9
47
78
11
126
40
0
1
57
1.13
143069--143146
35
2.2
35
80
8
88
48
2
0
48
1.15
144386--144426
18
2.4
17
87
4
55
41
2
2
53
1.27
145302--145352
16
3.0
16
74
23
50
52
1
0
45
1.12
146000--146060
25
2.4
26
83
8
81
55
4
3
36
1.38
146637--146767
11
12.8
11
68
26
76
56
0
0
43
0.99
146652--146704
16
3.4
15
73
17
54
50
0
0
49
1.00
146639--146747
32
3.6
32
71
25
85
55
0
0
44
0.99
146653--146760
37
3.1
34
80
16
107
56
0
0
43
0.99
149398--149431
16
2.1
16
100
0
68
55
5
14
23
1.61
151792--151844
4
13.0
4
80
11
63
71
0
0
28
0.86
151792--151844
21
2.4
21
84
15
63
71
0
0
28
0.86
151792--151845
20
2.6
21
88
2
74
70
0
0
29
0.88
152490--152514
12
2.1
12
100
0
50
68
0
0
32
0.90
152723--152755
9
3.3
10
91
8
50
39
0
6
54
1.25
153024--153073
19
2.4
22
77
12
61
38
6
0
56
1.24
153074--153111
17
2.3
17
86
4
51
42
0
0
57
0.98
153523--153581
8
7.4
8
82
5
57
72
0
1
25
0.93
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
153538--153581
16
2.6
17
82
7
63
72
0
0
27
0.85
153667--153747
28
2.7
30
83
7
85
58
1
3
37
1.24
154403--154459
20
2.9
20
79
20
59
40
0
0
59
0.97
154509--154631
30
4.1
30
79
12
146
47
4
1
46
1.33
155263--155294
16
2.0
16
93
0
55
53
0
0
46
1.00
155927--155953
2
13.5
2
100
0
54
48
0
0
51
1.00
165942--165994
24
2.2
23
78
15
54
73
5
3
16
1.17
167474--167591
45
2.5
48
82
5
134
31
20
27
21
1.98
167612--168119
32
15.8
32
93
2
851
16
18
33
30
1.94
168102--169144
27
38.0
27
90
3
1595
28
14
34
22
1.94
168087--169144
164
6.4
163
91
3
1622
28
14
34
22
1.94
170196--170220
13
1.9
13
100
0
50
0
0
16
84
0.63
176986--177044
24
2.5
24
75
5
57
6
20
0
72
1.06
177203--177236
10
3.5
10
84
8
52
23
5
8
61
1.47

Tables:   1   2

The End!