Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2276
Parameters: 2 7 7 80 10 50 1000
Length:  194101

Tables:   1   2   

This is table  2  of  2  ( 180 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
151228--151263
16
2.2
16
90
5
54
52
8
38
0
1.32
151451--151558
37
2.9
36
77
11
103
43
1
2
51
1.26
151642--151672
16
1.9
16
93
0
53
70
3
19
6
1.22
152076--152117
16
2.6
16
88
0
57
66
0
0
33
0.92
152446--152471
2
13.0
2
100
0
52
50
0
0
50
1.00
153106--153223
6
20.2
6
67
23
56
61
0
0
38
1.02
153097--153173
25
3.0
24
70
17
66
62
0
2
35
1.09
153097--153234
51
2.7
51
78
13
144
60
0
2
36
1.09
153097--153223
50
2.5
52
82
12
149
61
0
1
37
1.06
153097--153243
50
2.9
49
76
18
140
59
0
2
38
1.09
153478--153525
17
2.8
17
78
9
53
45
0
2
52
1.12
153777--153885
6
19.3
6
69
22
51
45
0
0
54
1.00
153763--153880
14
7.3
16
66
24
54
44
0
0
55
0.99
153770--153886
44
2.6
48
76
18
142
46
0
0
53
1.00
153778--153882
17
6.3
17
68
30
75
46
0
0
53
1.00
153783--153882
45
2.4
40
83
11
123
46
0
0
54
1.00
154072--154117
18
2.7
17
90
6
67
36
0
0
63
0.95
154284--154310
2
13.5
2
100
0
54
51
0
0
48
1.00
154712--154753
21
2.0
21
86
9
59
52
0
2
45
1.13
155067--155111
22
2.0
22
84
16
58
46
0
0
53
1.00
155107--155153
17
2.8
17
83
3
60
59
0
0
40
0.97
155167--155192
13
2.0
13
100
0
52
69
0
0
30
0.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
157272--157306
2
17.5
2
100
0
70
51
0
0
48
1.00
157983--158067
26
3.5
23
74
16
75
64
0
10
24
1.25
160115--160157
15
2.8
15
82
3
50
27
32
2
37
1.70
164148--164174
11
2.5
11
100
0
54
29
0
0
70
0.88
164296--164387
40
2.3
39
81
5
96
55
4
0
40
1.20
164617--164642
13
2.0
13
100
0
52
53
0
0
46
1.00
167357--167384
12
2.3
12
100
0
56
17
7
42
32
1.77
168600--168664
33
2.0
33
85
11
89
50
0
0
49
1.00
177292--177490
99
2.0
99
97
0
371
39
6
10
44
1.63
177683--177736
16
3.4
16
75
10
56
48
1
1
48
1.23
178195--178235
22
1.9
21
90
5
64
60
0
0
39
0.96
179430--179579
2
83.0
2
72
23
129
53
1
1
44
1.17
179421--179579
21
7.6
21
71
17
100
52
1
1
44
1.16
179430--179577
23
6.5
24
77
19
142
53
1
1
43
1.17
179435--179590
27
5.7
26
78
14
138
53
1
1
42
1.19
179421--179590
25
6.9
25
77
16
153
52
1
1
44
1.18
181346--181377
8
3.9
8
95
4
55
0
12
0
87
0.54
181592--181651
22
2.5
25
84
7
81
3
28
13
55
1.54
181592--181658
25
2.9
23
84
6
82
4
28
11
55
1.56
185847--185998
69
2.2
68
87
2
223
36
12
21
29
1.90
187395--187424
11
2.6
12
94
5
53
0
13
0
86
0.57
188410--188436
13
2.1
13
100
0
54
14
0
7
77
0.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
188431--188477
17
2.9
17
81
9
62
21
2
0
76
0.89
188416--188475
30
1.9
32
86
6
88
20
1
1
76
0.96
188411--188477
30
2.2
28
78
14
71
20
1
2
74
1.03
191593--191720
52
2.5
52
94
3
224
30
17
17
33
1.94
191729--191753
13
1.9
13
100
0
50
36
16
16
32
1.90
191819--191843
13
1.9
13
100
0
50
32
16
16
36
1.90
191797--191863
33
2.0
33
88
0
98
40
13
11
34
1.81
192851--193120
94
2.9
92
84
3
350
31
15
16
37
1.89
192807--193120
89
3.5
89
80
8
364
31
14
16
37
1.89
193193--193288
7
14.6
7
79
11
98
42
2
1
54
1.19
193204--193288
2
45.5
2
78
13
92
43
2
0
54
1.13
193203--193288
27
3.3
25
82
14
95
43
2
0
54
1.13
193316--193366
9
5.7
9
75
9
50
23
0
1
74
0.92
193317--193350
17
2.0
17
88
0
50
23
0
0
76
0.79
193318--193366
8
5.8
8
79
13
53
24
0
2
73
0.94
193335--193379
19
2.4
19
88
7
65
35
0
4
60
1.17

Tables:   1   2

The End!