Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2284
Parameters: 2 7 7 80 10 50 1000
Length:  24259

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2503--2547
21
2.0
23
91
8
76
26
15
11
46
1.79
5879--5930
1
52.0
1
94
0
77
94
0
1
3
0.37
5876--5932
19
3.1
19
87
10
91
85
0
3
10
0.70
5934--5990
21
2.7
21
97
0
105
33
10
19
36
1.86
6046--6113
19
3.9
19
78
21
85
35
11
14
38
1.83
6067--6091
13
1.9
13
100
0
50
36
16
16
32
1.90
6048--6110
32
2.0
32
96
0
117
34
12
15
36
1.86
6153--6178
13
2.0
13
100
0
52
30
15
15
38
1.88
6133--6199
33
2.0
33
88
0
98
25
14
16
43
1.86
8647--9028
52
7.3
52
71
15
261
28
25
13
32
1.93
8647--9027
104
3.6
103
75
15
402
28
25
13
33
1.93
8800--8872
28
2.6
30
87
8
100
24
30
19
26
1.98
8532--9095
212
2.6
212
96
1
1004
27
26
14
31
1.94
9012--9088
28
2.8
28
87
0
100
23
33
19
23
1.97
21621--21707
1
87.0
1
86
0
120
93
3
3
0
0.43
22664--23816
53
21.4
54
89
6
1645
28
30
20
20
1.98

Tables:   1

The End!