Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold235
Parameters: 2 7 7 80 10 50 1000
Length:  318222

Tables:   1   2   

This is table  2  of  2  ( 142 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
261460--261520
9
7.1
9
76
10
65
11
42
1
44
1.50
261432--261537
42
2.5
42
87
0
158
10
45
1
42
1.49
261432--261550
42
2.8
42
83
2
150
9
43
1
45
1.46
264058--264086
14
2.1
14
100
0
58
41
13
20
24
1.89
267640--280343
474
26.7
477
81
6
13444
32
18
14
34
1.91
286820--286858
19
2.1
19
100
0
78
28
20
20
30
1.98
288067--288185
42
2.8
42
85
2
150
10
42
1
44
1.49
289737--291898
474
4.6
476
86
4
2894
32
18
14
34
1.91
296864--296995
42
3.1
42
87
2
176
8
43
3
44
1.49
299914--302774
475
6.1
474
85
4
3610
33
18
13
34
1.90
303469--308194
475
10.0
474
85
4
6033
32
18
14
34
1.91
303469--308194
949
5.0
948
85
4
6145
32
18
14
34
1.91
307979--308376
214
1.9
213
87
2
584
33
19
14
32
1.92
307508--308884
690
2.0
684
84
4
1808
33
18
14
33
1.91
308193--309131
476
2.0
475
84
4
1257
31
17
15
35
1.92
309426--309477
19
2.7
20
87
6
79
28
15
13
42
1.85
309406--309477
20
3.7
19
83
5
81
31
18
12
37
1.88
310547--313562
475
6.3
474
86
2
4025
32
18
13
35
1.90
310547--315468
954
5.2
949
85
4
6191
31
18
14
35
1.91
313135--315424
475
5.0
427
80
10
1525
31
19
14
34
1.91
313577--315439
475
3.9
477
89
2
2620
31
19
14
34
1.92
316172--318141
476
4.2
476
85
3
2632
31
18
14
35
1.91

Tables:   1   2

The End!