Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2393
Parameters: 2 7 7 80 10 50 1000
Length:  32652

Tables:   1   

This is table  1  of  1  ( 29 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5145--5267
42
2.9
42
89
2
167
8
43
2
44
1.48
6018--6058
19
2.2
19
95
0
73
4
12
4
78
1.07
11346--11381
18
2.0
18
88
0
54
66
0
0
33
0.92
14839--14871
16
2.0
17
94
5
59
39
0
6
54
1.25
14839--14871
17
2.1
16
88
11
50
39
0
6
54
1.25
16686--16716
10
3.1
10
90
0
53
41
6
29
22
1.78
16740--16876
53
2.6
53
94
1
238
26
17
18
37
1.93
16846--16916
20
3.5
20
77
11
74
29
14
16
39
1.88
16956--16996
21
2.0
21
85
9
57
39
9
12
39
1.76
18714--18766
28
2.0
28
85
7
74
64
0
1
33
1.05
20126--20158
10
3.3
10
95
0
57
45
0
0
54
0.99
20678--20716
3
13.0
3
100
0
78
66
0
0
33
0.92
21034--21076
14
3.0
14
82
3
50
65
0
11
23
1.25
21937--22002
22
3.0
21
78
10
62
40
0
1
57
1.08
22261--22326
19
3.6
19
78
19
61
63
0
3
33
1.10
22378--22437
21
2.5
24
79
17
72
41
0
1
56
1.09
22402--22446
22
2.0
23
82
4
56
46
0
2
51
1.13
22433--22468
18
2.0
18
94
0
63
58
0
5
36
1.22
23164--23271
51
2.1
51
98
0
207
43
4
5
46
1.47
23738--23792
18
3.1
17
74
7
56
69
10
5
14
1.35
24128--24154
2
13.5
2
100
0
54
0
51
0
48
1.00
24827--24887
9
6.7
9
76
10
52
73
0
1
24
0.92
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24833--24883
19
2.8
18
82
11
59
72
0
1
25
0.95
25484--25518
3
11.7
3
100
0
70
34
0
0
65
0.93
26110--26163
16
3.6
16
80
7
51
44
1
5
48
1.37
26672--26710
21
1.9
20
84
5
51
69
0
2
28
1.02
26713--26780
24
2.8
25
75
20
72
44
0
0
55
0.99
27967--28066
49
2.0
49
94
0
173
27
23
3
47
1.66
30857--30910
2
27.0
2
88
0
81
51
3
0
44
1.19

Tables:   1

The End!