Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2407
Parameters: 2 7 7 80 10 50 1000
Length:  35961

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2501--2545
3
14.7
3
95
4
81
66
2
0
31
1.04
2502--2544
22
2.0
22
100
0
86
65
2
0
32
1.06
5239--5268
2
15.0
2
100
0
60
50
0
50
0
1.00
5809--5838
9
3.3
9
95
0
51
53
0
46
0
1.00
6415--6453
21
1.9
20
89
5
60
64
7
2
25
1.33
7982--8051
27
2.6
27
90
4
106
52
0
0
47
1.00
10848--10915
19
3.9
18
76
23
83
35
11
16
36
1.85
10850--10912
32
2.0
32
96
0
117
34
12
17
34
1.88
10869--10893
13
1.9
13
100
0
50
36
16
16
32
1.90
14907--14949
22
2.0
22
85
0
59
51
11
4
32
1.59
20927--20998
28
2.6
28
88
0
99
23
19
34
22
1.96
20986--21210
52
4.3
51
79
5
225
32
12
25
29
1.92
21193--21268
27
2.8
28
89
2
109
21
21
34
23
1.97
20987--21374
51
7.3
53
70
15
182
31
12
25
29
1.93
23733--23758
13
2.0
13
100
0
52
38
15
15
30
1.88
23712--23778
33
2.0
33
88
0
98
43
16
14
25
1.86
23801--23825
13
1.9
13
100
0
50
32
16
16
36
1.90
23882--23960
21
3.8
20
86
5
95
34
15
13
36
1.87
24730--24870
28
5.1
27
62
15
65
21
19
30
27
1.98
24706--25576
59
14.9
59
91
3
1190
25
20
28
25
1.99
26554--26586
12
2.8
12
95
0
57
0
0
15
84
0.61
26554--26586
17
1.9
17
93
0
57
0
0
15
84
0.61

Tables:   1

The End!