Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2422
Parameters: 2 7 7 80 10 50 1000
Length:  193378

Tables:   1   2   

This is table  2  of  2  ( 138 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
172172--172721
197
2.9
188
82
5
650
31
18
25
24
1.97
172404--172680
92
3.0
92
83
5
367
31
18
24
25
1.97
172783--172908
28
4.4
28
85
2
162
19
16
26
36
1.93
172899--172973
35
2.2
35
87
2
116
34
10
33
21
1.88
172949--173122
29
6.0
29
79
7
192
26
16
29
27
1.97
172958--173128
86
2.0
86
86
4
238
24
16
29
28
1.97
174023--174062
21
1.9
21
100
0
80
22
10
27
40
1.86
174097--174122
10
2.6
10
100
0
52
30
0
23
46
1.53
174883--174911
13
2.2
13
100
0
58
27
13
17
41
1.87
175656--175699
22
2.0
22
95
0
79
36
2
11
50
1.51
175808--175837
11
2.7
11
94
0
51
33
0
0
66
0.92
175952--175988
15
2.4
16
86
13
51
21
18
21
37
1.94
180692--180722
2
15.5
2
93
0
53
48
3
0
48
1.17
181698--181734
15
2.4
16
86
13
51
70
5
5
18
1.27
182478--182515
15
2.4
17
82
13
53
57
0
0
42
0.98
182478--182515
16
2.4
16
86
8
51
57
0
0
42
0.98
182536--182564
13
2.1
14
93
6
51
55
0
3
41
1.17
182580--182621
22
1.9
22
85
0
57
47
2
4
45
1.36

Tables:   1   2

The End!