Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2434
Parameters: 2 7 7 80 10 50 1000
Length:  24480

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
748--965
72
3.0
72
90
1
339
35
18
11
33
1.87
1735--1773
19
2.2
18
86
9
53
48
0
0
51
1.00
2326--2358
16
2.1
15
94
5
57
33
0
6
60
1.21
2312--2360
16
2.9
16
80
20
55
32
0
8
59
1.27
2707--2775
32
2.2
32
86
5
95
50
2
1
44
1.25
2707--2755
9
5.9
9
76
13
52
53
2
2
42
1.24
3245--3355
44
2.7
43
80
15
119
44
0
0
54
1.06
8388--8428
15
2.7
16
85
11
59
51
7
0
41
1.30
8915--8972
22
2.5
22
83
5
71
50
0
5
44
1.24
8963--9059
25
3.7
27
76
13
96
34
2
1
62
1.13
9533--9624
31
2.9
30
79
9
105
46
3
7
42
1.48
9533--9624
32
2.9
31
80
6
114
46
3
7
42
1.48
9991--10029
5
7.8
5
83
11
53
35
0
0
64
0.94
9990--10032
19
2.2
20
91
8
70
32
0
0
67
0.91
11582--11619
20
1.9
20
88
0
58
36
21
10
31
1.87
15675--15758
34
2.5
35
92
5
145
25
8
26
40
1.83
16667--16721
16
3.4
16
76
16
60
58
0
23
18
1.39
16666--16713
16
2.9
16
82
11
62
60
0
22
16
1.36
17741--17807
25
2.7
24
73
17
64
49
7
2
40
1.46
18062--18128
16
4.2
16
81
7
73
56
13
1
28
1.46
18073--18162
32
2.8
32
80
8
94
56
13
3
26
1.52
18104--18166
16
3.9
16
78
12
58
55
14
4
25
1.58
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19013--19056
21
2.0
22
83
12
56
59
0
0
40
0.98
22619--22656
16
2.2
18
90
9
62
73
0
0
26
0.83
22616--22667
11
4.7
11
77
15
54
69
1
0
28
0.99
22698--22748
19
2.8
19
85
5
61
50
0
0
49
1.00
22686--22753
11
5.9
12
73
19
56
54
0
0
45
0.99
23326--23370
23
1.9
24
86
4
65
51
0
2
46
1.13

Tables:   1

The End!