Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2494
Parameters: 2 7 7 80 10 50 1000
Length:  76010

Tables:   1   

This is table  1  of  1  ( 30 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
41--102
33
1.9
32
93
3
106
20
22
17
38
1.93
1491--1533
21
2.0
22
95
4
79
23
9
23
44
1.82
2939--2969
15
2.1
15
100
0
62
6
19
12
61
1.53
7536--7565
3
10.0
3
100
0
60
33
0
0
66
0.92
13691--13715
1
25.0
1
100
0
50
0
100
0
0
0.00
14857--14915
31
1.9
31
92
0
100
32
16
13
37
1.88
15276--15319
17
2.6
17
85
7
54
9
22
0
68
1.18
21911--21947
2
18.5
2
88
0
56
43
0
5
51
1.24
25560--25591
16
2.0
16
100
0
64
37
6
12
43
1.68
27229--27320
28
3.3
28
76
11
100
45
0
3
51
1.17
27294--27351
23
2.5
24
77
8
66
44
0
1
53
1.10
27366--27397
15
2.1
16
88
11
50
62
0
0
37
0.95
30873--30914
16
2.6
16
84
3
57
14
2
0
83
0.75
38058--38119
33
1.9
32
93
3
106
20
22
17
38
1.93
39512--39553
21
2.0
21
100
0
84
23
9
19
47
1.78
40958--40988
15
2.1
15
100
0
62
6
19
12
61
1.53
45554--45583
3
10.0
3
100
0
60
33
0
0
66
0.92
52863--52920
30
1.9
31
89
3
91
29
17
13
39
1.88
53281--53325
17
2.6
17
86
10
56
8
22
0
68
1.16
59914--59950
2
18.5
2
88
0
56
43
0
5
51
1.24
63564--63595
16
2.0
16
100
0
64
37
6
12
43
1.68
65222--65358
28
4.9
28
72
14
88
42
0
2
54
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
65222--65358
29
4.9
27
73
12
89
42
0
2
54
1.15
65209--65358
57
2.6
56
78
11
164
42
0
3
54
1.17
65244--65323
27
2.8
28
81
14
94
40
0
3
56
1.17
65216--65358
56
2.5
54
76
14
155
41
0
2
55
1.14
65348--65391
17
2.6
17
81
0
61
54
0
2
43
1.12
65380--65412
15
2.1
16
94
5
59
63
0
0
36
0.95
65371--65409
20
2.0
19
85
5
51
64
0
0
35
0.94
68895--68936
16
2.6
16
84
3
57
14
2
0
83
0.75

Tables:   1

The End!