Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2495
Parameters: 2 7 7 80 10 50 1000
Length:  186439

Tables:   1   2   

This is table  2  of  2  ( 144 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
147850--147937
1
88.0
1
77
0
68
0
7
5
86
0.71
147850--147939
31
3.0
30
91
6
146
0
10
5
84
0.77
157245--157325
21
3.8
21
90
1
117
44
1
13
40
1.52
158184--158222
20
2.0
20
90
5
62
51
0
0
48
1.00
159020--159063
2
22.0
2
90
0
61
43
0
6
50
1.29
159018--159060
14
3.1
14
93
0
77
39
0
9
51
1.34
163109--163156
3
16.0
3
91
0
78
62
0
37
0
0.95
163751--163788
13
2.7
14
84
12
51
60
0
0
39
0.97
163745--163790
14
3.2
14
77
22
51
58
0
0
41
0.98
164404--164628
34
6.7
33
80
8
256
41
25
7
25
1.81
164404--164628
102
2.2
101
88
1
342
41
25
7
25
1.81
169035--169254
34
6.5
33
76
8
185
43
23
5
27
1.76
169041--169251
68
3.1
68
78
8
225
43
22
5
28
1.76
169035--169254
102
2.2
101
81
4
264
43
23
5
27
1.76
171469--171494
2
13.0
2
100
0
52
0
0
50
50
1.00
173014--173042
13
2.1
14
93
6
51
55
0
0
44
0.99
181596--181671
1
76.0
1
76
0
71
88
9
1
1
0.64
181596--181671
29
2.6
29
91
4
118
88
9
1
1
0.64
181595--181669
13
6.0
12
86
9
89
86
10
1
1
0.69
182879--184228
28
47.4
29
87
4
1789
27
32
17
22
1.96
182881--184228
568
2.4
567
91
4
2164
27
32
17
22
1.97
184716--184770
20
2.8
19
75
8
65
34
12
14
38
1.84
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
185682--185733
21
2.5
21
93
3
88
15
11
9
63
1.52
185696--185740
21
2.2
21
88
4
65
22
11
11
55
1.66

Tables:   1   2

The End!