Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2538
Parameters: 2 7 7 80 10 50 1000
Length:  33494

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54--4692
475
9.8
475
95
1
7717
29
20
14
35
1.93
3908--5471
792
2.0
794
92
0
2630
28
20
14
35
1.92
4689--8811
476
8.7
476
93
0
6699
29
20
14
35
1.93
8014--18324
794
13.0
794
69
11
4566
29
20
14
35
1.92
8808--11984
476
6.7
475
94
1
5324
29
20
14
35
1.92
11980--26152
476
29.7
475
85
5
14512
29
20
14
35
1.92
11980--26152
950
14.8
952
82
5
14803
29
20
14
35
1.92
570--18647
159
114.1
157
62
11
2063
29
20
14
35
1.92
25354--26793
159
9.1
157
63
14
482
28
20
14
35
1.92
25830--26470
318
2.0
318
98
0
1246
28
20
14
36
1.92
25354--26946
794
2.0
794
97
0
3042
29
20
14
36
1.92
25376--27263
794
2.4
791
88
3
2196
29
20
14
35
1.92
26148--31696
476
11.7
476
92
0
8737
29
20
14
35
1.92
26148--31696
950
5.8
952
91
0
8785
29
20
14
35
1.92
31375--32016
318
2.0
316
90
0
1016
29
21
13
35
1.92
31492--31993
159
3.2
158
70
9
462
29
19
14
36
1.92
25354--32487
791
9.0
792
68
11
2616
29
20
14
35
1.92
31692--33424
950
1.8
947
90
2
2778
29
20
14
35
1.92
31692--33436
473
3.7
475
92
2
2738
29
20
14
35
1.92

Tables:   1

The End!