Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2540
Parameters: 2 7 7 80 10 50 1000
Length:  13961

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
299--1068
392
2.0
395
82
7
967
30
18
14
35
1.92
1998--2662
154
4.3
156
68
14
421
29
19
15
35
1.93
1564--2869
467
2.8
469
90
5
1960
30
18
14
36
1.91
2034--12544
870
12.1
870
97
1
19466
30
18
14
36
1.91
3356--4131
396
2.0
395
89
2
1182
30
18
14
36
1.91
3838--4556
158
4.6
158
70
10
435
29
18
14
37
1.91
4226--5000
395
2.0
394
88
1
1169
30
18
14
36
1.91
5095--5870
395
2.0
395
89
1
1180
31
18
14
36
1.90
5576--6296
158
4.6
160
70
9
445
29
18
14
37
1.91
5965--6740
395
2.0
395
88
1
1144
31
18
14
36
1.90
6835--7610
395
2.0
395
88
1
1162
31
18
14
36
1.90
7707--8478
395
2.0
394
88
1
1172
30
18
14
36
1.90
8573--9345
395
2.0
392
87
2
1131
31
18
14
36
1.90
9488--10203
395
1.8
395
89
1
1121
30
18
14
36
1.90
9908--10629
158
4.5
161
70
9
442
29
18
14
37
1.91
12689--13459
392
2.0
390
87
3
1102
30
18
14
36
1.91

Tables:   1

The End!