Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Scaffold2614
Parameters: 2 7 7 80 10 50 1000
Length:  28700

Tables:   1   

This is table  1  of  1  ( 24 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1351--1406
22
2.5
22
85
0
76
35
7
16
41
1.75
5027--5242
20
9.7
20
70
20
135
42
11
15
30
1.82
5027--5203
51
3.7
48
74
16
181
43
10
15
30
1.80
5027--5253
91
2.5
92
92
1
377
42
11
15
29
1.82
5946--6145
48
4.3
46
85
8
201
33
18
27
21
1.96
5936--6145
47
4.5
46
84
5
235
33
18
27
20
1.96
6029--6101
22
3.2
24
66
22
66
31
19
28
20
1.97
5982--6145
44
3.6
45
88
5
222
32
17
28
21
1.96
6257--10085
28
136.0
28
83
4
3997
24
16
27
30
1.97
6257--11397
56
90.8
56
81
5
5403
24
16
27
30
1.97
6257--11374
84
60.2
84
82
6
5389
24
16
27
30
1.97
10047--10124
39
2.0
39
92
0
129
23
21
28
26
1.99
10086--11391
28
45.8
29
76
10
1015
23
16
28
30
1.97
10479--10556
39
2.0
39
92
0
129
23
21
28
26
1.99
10911--10988
39
2.0
39
92
0
129
23
21
28
26
1.99
10951--11460
56
9.1
55
83
5
569
22
17
29
29
1.97
10961--11482
28
18.6
28
84
6
189
23
16
30
29
1.96
11401--11479
27
2.9
27
90
1
113
25
13
30
30
1.94
12818--12878
32
2.0
30
83
6
77
9
11
6
72
1.29
22892--23023
24
5.2
25
75
11
106
22
7
23
46
1.77
22895--22959
26
2.4
28
89
5
98
23
7
23
46
1.78
27487--27609
28
4.7
26
79
6
83
21
6
26
46
1.75
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
27487--27557
27
2.6
27
86
6
90
22
5
23
47
1.72
27542--27611
24
2.8
25
89
6
99
21
8
25
44
1.80

Tables:   1

The End!